Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 AC136621.1-201ENST00000624017 2304 ntBASIC15.87■□□□□ 0.13
NDE1Q9NXR1 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 SPDYE21P-201ENST00000413323 827 ntBASIC15.87■□□□□ 0.13
NDE1Q9NXR1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 AC010203.1-204ENST00000548782 407 ntBASIC15.87■□□□□ 0.13
NDE1Q9NXR1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 AC010654.1-201ENST00000615722 808 ntBASIC15.87■□□□□ 0.13
NDE1Q9NXR1 HYMAI.1-201ENST00000620949 238 ntBASIC15.87■□□□□ 0.13
NDE1Q9NXR1 PGM5P2-202ENST00000637225 1043 ntBASIC15.87■□□□□ 0.13
NDE1Q9NXR1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDE1Q9NXR1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 MIR4492-201ENST00000581627 80 ntBASIC15.86■□□□□ 0.13
NDE1Q9NXR1 MPDU1-223ENST00000582151 728 ntBASIC15.86■□□□□ 0.13
NDE1Q9NXR1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDE1Q9NXR1 SIGLEC16-201ENST00000599858 1437 ntBASIC15.85■□□□□ 0.13
NDE1Q9NXR1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 AC004817.3-201ENST00000602957 2129 ntBASIC15.85■□□□□ 0.13
NDE1Q9NXR1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
NDE1Q9NXR1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms