Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 PCGF3-213ENST00000620529 1899 ntBASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 TOP3BP1-201ENST00000420768 1380 ntBASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCM2LQ9NUG4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 AC004817.3-201ENST00000602957 2129 ntBASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 AC006486.2-201ENST00000624246 2199 ntBASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 UPF3AP3-201ENST00000420996 769 ntBASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 AL020989.1-201ENST00000422979 469 ntBASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 SCARNA2-201ENST00000458748 420 ntBASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 AC010327.4-202ENST00000591484 748 ntBASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 AC140113.2-201ENST00000604370 208 ntBASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 AC104109.2-201ENST00000602919 1418 ntBASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCM2LQ9NUG4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCM2LQ9NUG4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.58■□□□□ 0.09
CCM2LQ9NUG4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.58■□□□□ 0.09
CCM2LQ9NUG4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCM2LQ9NUG4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCM2LQ9NUG4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCM2LQ9NUG4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCM2LQ9NUG4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.58■□□□□ 0.09
CCM2LQ9NUG4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CCM2LQ9NUG4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 MIR648-201ENST00000385046 94 ntBASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 LINC00982-205ENST00000420957 435 ntBASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 HNRNPDP1-201ENST00000439535 754 ntBASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 MIR4492-201ENST00000581627 80 ntBASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 AC027601.4-201ENST00000611259 610 ntBASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 AL355877.3-201ENST00000622820 899 ntBASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCM2LQ9NUG4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms