Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 AL391825.1-201ENST00000457671 1364 ntBASIC19.51■□□□□ 0.71
SALL1Q9NSC2 COX5BP8-201ENST00000416911 349 ntBASIC19.51■□□□□ 0.71
SALL1Q9NSC2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.51■□□□□ 0.71
SALL1Q9NSC2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 AC007541.1-201ENST00000570282 1469 ntBASIC19.5■□□□□ 0.71
SALL1Q9NSC2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 GNAQP1-201ENST00000444815 1067 ntBASIC19.5■□□□□ 0.71
SALL1Q9NSC2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 AC093004.1-201ENST00000508850 424 ntBASIC19.5■□□□□ 0.71
SALL1Q9NSC2 DOC2GP-202ENST00000514950 1163 ntBASIC19.5■□□□□ 0.71
SALL1Q9NSC2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SALL1Q9NSC2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 AC092364.2-201ENST00000596710 2692 ntBASIC19.49■□□□□ 0.71
SALL1Q9NSC2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 AC018695.7-201ENST00000624587 2492 ntBASIC19.49■□□□□ 0.71
SALL1Q9NSC2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 NME2P1-201ENST00000426182 414 ntBASIC19.49■□□□□ 0.71
SALL1Q9NSC2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 RN7SL692P-201ENST00000464677 288 ntBASIC19.49■□□□□ 0.71
SALL1Q9NSC2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 AC092337.1-201ENST00000568699 1129 ntBASIC19.49■□□□□ 0.71
SALL1Q9NSC2 AC140912.1-201ENST00000577171 1054 ntBASIC19.49■□□□□ 0.71
SALL1Q9NSC2 AC025048.3-201ENST00000590609 569 ntBASIC19.49■□□□□ 0.71
SALL1Q9NSC2 SRD5A3P1-201ENST00000603021 949 ntBASIC19.49■□□□□ 0.71
SALL1Q9NSC2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 AC005702.4-201ENST00000618393 416 ntBASIC19.49■□□□□ 0.71
SALL1Q9NSC2 AC004461.2-201ENST00000629517 803 ntBASIC19.49■□□□□ 0.71
SALL1Q9NSC2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SALL1Q9NSC2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SALL1Q9NSC2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.48■□□□□ 0.71
SALL1Q9NSC2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SALL1Q9NSC2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SALL1Q9NSC2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SALL1Q9NSC2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SALL1Q9NSC2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SALL1Q9NSC2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms