Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FLJ16779-201ENST00000612722 7638 ntBASIC16.88■□□□□ 0.29
HPS4Q9NQG7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 COX5BP8-201ENST00000416911 349 ntBASIC16.88■□□□□ 0.29
HPS4Q9NQG7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 NME2P1-201ENST00000426182 414 ntBASIC16.88■□□□□ 0.29
HPS4Q9NQG7 CR383656.12-201ENST00000549567 513 ntBASIC16.88■□□□□ 0.29
HPS4Q9NQG7 AL079307.3-201ENST00000556114 283 ntBASIC16.88■□□□□ 0.29
HPS4Q9NQG7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HPS4Q9NQG7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 AL139384.1-201ENST00000612143 3047 ntBASIC16.87■□□□□ 0.29
HPS4Q9NQG7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 AL391256.1-201ENST00000443260 1855 ntBASIC16.87■□□□□ 0.29
HPS4Q9NQG7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 AL512652.2-201ENST00000625156 1716 ntBASIC16.87■□□□□ 0.29
HPS4Q9NQG7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 AC018695.7-201ENST00000624587 2492 ntBASIC16.87■□□□□ 0.29
HPS4Q9NQG7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HPS4Q9NQG7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.86■□□□□ 0.29
HPS4Q9NQG7 AC093724.1-201ENST00000448659 1027 ntBASIC16.86■□□□□ 0.29
HPS4Q9NQG7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms