Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 AC079602.3-201ENST00000623931 403 ntBASIC19.41■□□□□ 0.7
RTN4Q9NQC3 AC141257.4-201ENST00000634557 245 ntBASIC19.41■□□□□ 0.7
RTN4Q9NQC3 AC136944.6-201ENST00000634818 245 ntBASIC19.41■□□□□ 0.7
RTN4Q9NQC3 AP006294.2-201ENST00000641667 209 ntBASIC19.41■□□□□ 0.7
RTN4Q9NQC3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RTN4Q9NQC3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 AL138966.2-201ENST00000621997 464 ntBASIC19.4■□□□□ 0.7
RTN4Q9NQC3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 AC016396.2-201ENST00000562575 1417 ntBASIC19.4■□□□□ 0.7
RTN4Q9NQC3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN4Q9NQC3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
RTN4Q9NQC3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC19.39■□□□□ 0.7
RTN4Q9NQC3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RTN4Q9NQC3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN4Q9NQC3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms