Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 AC254562.1-201ENST00000417586 456 ntBASIC13.99□□□□□ -0.17
GCM1Q9NP62 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 AP000344.2-201ENST00000512987 629 ntBASIC13.99□□□□□ -0.17
GCM1Q9NP62 KRT8P48-201ENST00000515599 1220 ntBASIC13.99□□□□□ -0.17
GCM1Q9NP62 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 AC243562.1-201ENST00000560672 389 ntBASIC13.99□□□□□ -0.17
GCM1Q9NP62 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 AL513210.1-201ENST00000629608 234 ntBASIC13.99□□□□□ -0.17
GCM1Q9NP62 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GCM1Q9NP62 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.99□□□□□ -0.17
GCM1Q9NP62 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 RPS8P6-201ENST00000426177 609 ntBASIC13.98□□□□□ -0.17
GCM1Q9NP62 DNAJB3-202ENST00000449667 1266 ntBASIC13.98□□□□□ -0.17
GCM1Q9NP62 AC079140.1-201ENST00000508039 487 ntBASIC13.98□□□□□ -0.17
GCM1Q9NP62 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 SNHG9-202ENST00000564014 471 ntBASIC13.98□□□□□ -0.17
GCM1Q9NP62 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 AC022145.2-201ENST00000598203 171 ntBASIC13.98□□□□□ -0.17
GCM1Q9NP62 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GCM1Q9NP62 GGT3P-204ENST00000453783 1664 ntBASIC13.98□□□□□ -0.17
GCM1Q9NP62 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
GCM1Q9NP62 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GCM1Q9NP62 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
GCM1Q9NP62 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms