Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SND1-IT1Q9HBX3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 PPT1-215ENST00000641471 2368 ntBASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 AC006277.1-201ENST00000624348 1610 ntBASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 LINC02447-202ENST00000501888 2146 ntBASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 AP002414.1-201ENST00000391405 1147 ntBASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 AC005521.1-201ENST00000393351 872 ntBASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 AL020989.1-201ENST00000422979 469 ntBASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 KRT18P57-201ENST00000443599 1254 ntBASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ABR-217ENST00000572441 563 ntTSL 4 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 TP73-AS1-210ENST00000637775 1455 ntBASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.99□□□□□ -0.65
SND1-IT1Q9HBX3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 CDC14C-201ENST00000428251 1719 ntBASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
SND1-IT1Q9HBX3 AL671277.2-201ENST00000458060 996 ntBASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms