Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 GPS2P2-201ENST00000430745 888 ntBASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 METTL21AP1-201ENST00000438852 635 ntBASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 HLA-J-203ENST00000494367 1087 ntBASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 RNA5SP410-201ENST00000516285 106 ntBASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 AL662844.4-201ENST00000606367 2838 ntBASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC4Q9HBW1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.21■□□□□ 0.34
LRRC4Q9HBW1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.21■□□□□ 0.34
LRRC4Q9HBW1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.21■□□□□ 0.34
LRRC4Q9HBW1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 AL139400.1-201ENST00000366220 510 ntBASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 FAM220BP-201ENST00000377689 816 ntBASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 AC026150.2-201ENST00000564693 1156 ntBASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 RARRES2P9-201ENST00000565168 469 ntBASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 AC024267.1-201ENST00000582320 895 ntBASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 AC092364.2-201ENST00000596710 2692 ntBASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC4Q9HBW1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 SPDYE14P-201ENST00000442619 822 ntBASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 AC109322.1-201ENST00000524499 1264 ntBASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 AC025678.2-201ENST00000562061 970 ntBASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 AL365330.1-201ENST00000607459 531 ntBASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 AP001059.3-201ENST00000619053 235 ntBASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 AL592424.1-201ENST00000563624 1536 ntBASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LRRC4Q9HBW1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms