Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 RPS8P6-201ENST00000426177 609 ntBASIC16.73■□□□□ 0.27
SP110Q9HB58 AP006288.1-201ENST00000446065 395 ntBASIC16.73■□□□□ 0.27
SP110Q9HB58 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.73■□□□□ 0.27
SP110Q9HB58 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.73■□□□□ 0.27
SP110Q9HB58 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SP110Q9HB58 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.73■□□□□ 0.27
SP110Q9HB58 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SP110Q9HB58 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.73■□□□□ 0.27
SP110Q9HB58 AP000842.3-202ENST00000569238 1080 ntBASIC16.73■□□□□ 0.27
SP110Q9HB58 AL596442.2-201ENST00000610240 980 ntBASIC16.73■□□□□ 0.27
SP110Q9HB58 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SP110Q9HB58 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SP110Q9HB58 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
SP110Q9HB58 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SP110Q9HB58 PKD1P5-201ENST00000532415 10291 ntBASIC16.73■□□□□ 0.27
SP110Q9HB58 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.73■□□□□ 0.27
SP110Q9HB58 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SP110Q9HB58 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SP110Q9HB58 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SP110Q9HB58 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SP110Q9HB58 AC006449.6-201ENST00000612330 2296 ntBASIC16.72■□□□□ 0.27
SP110Q9HB58 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SP110Q9HB58 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.72■□□□□ 0.27
SP110Q9HB58 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
SP110Q9HB58 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SP110Q9HB58 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.72■□□□□ 0.27
SP110Q9HB58 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.72■□□□□ 0.27
SP110Q9HB58 KRT18P32-201ENST00000424695 1287 ntBASIC16.72■□□□□ 0.27
SP110Q9HB58 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.72■□□□□ 0.27
SP110Q9HB58 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.72■□□□□ 0.27
SP110Q9HB58 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.72■□□□□ 0.27
SP110Q9HB58 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.72■□□□□ 0.27
SP110Q9HB58 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.72■□□□□ 0.27
SP110Q9HB58 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SP110Q9HB58 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SP110Q9HB58 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.72■□□□□ 0.27
SP110Q9HB58 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.72■□□□□ 0.27
SP110Q9HB58 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 AC079781.4-201ENST00000641908 219 ntBASIC16.72■□□□□ 0.27
SP110Q9HB58 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.72■□□□□ 0.27
SP110Q9HB58 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SP110Q9HB58 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.72■□□□□ 0.27
SP110Q9HB58 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.72■□□□□ 0.27
SP110Q9HB58 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SP110Q9HB58 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SP110Q9HB58 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.71■□□□□ 0.27
SP110Q9HB58 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 AL592424.1-201ENST00000563624 1536 ntBASIC16.71■□□□□ 0.27
SP110Q9HB58 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
SP110Q9HB58 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SP110Q9HB58 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.71■□□□□ 0.27
SP110Q9HB58 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
SP110Q9HB58 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
SP110Q9HB58 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.71■□□□□ 0.27
SP110Q9HB58 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.71■□□□□ 0.27
SP110Q9HB58 AC142381.1-201ENST00000426099 345 ntBASIC16.71■□□□□ 0.27
SP110Q9HB58 CNN2P11-201ENST00000429351 262 ntBASIC16.71■□□□□ 0.27
SP110Q9HB58 DNAJB3-202ENST00000449667 1266 ntBASIC16.71■□□□□ 0.27
SP110Q9HB58 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.71■□□□□ 0.27
SP110Q9HB58 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SP110Q9HB58 LINC01225-203ENST00000563550 1244 ntBASIC16.71■□□□□ 0.27
SP110Q9HB58 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.71■□□□□ 0.27
SP110Q9HB58 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.71■□□□□ 0.27
SP110Q9HB58 SPTSSB-204ENST00000617024 1292 ntBASIC16.71■□□□□ 0.27
SP110Q9HB58 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.71■□□□□ 0.27
SP110Q9HB58 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.71■□□□□ 0.27
SP110Q9HB58 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SP110Q9HB58 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SP110Q9HB58 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SP110Q9HB58 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
SP110Q9HB58 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SP110Q9HB58 AL589702.1-201ENST00000641229 1509 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms