Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 AC005336.2-201ENST00000593183 939 ntBASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLIRPQ9GZT3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 HMGA1P5-201ENST00000412453 271 ntBASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 AC012618.2-201ENST00000428058 849 ntBASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 AC233702.5-201ENST00000584107 538 ntBASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 AC148477.5-201ENST00000625164 1645 ntBASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 AC126365.1-201ENST00000578585 1514 ntBASIC14.36□□□□□ -0.11
SLIRPQ9GZT3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 FAM8A6P-201ENST00000407496 1135 ntBASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 MIR1238-201ENST00000408483 83 ntBASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.35□□□□□ -0.11
SLIRPQ9GZT3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms