Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 SLC25A1P1-201ENST00000528351 927 ntBASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 AL009183.1-201ENST00000603760 355 ntBASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 AC069224.1-201ENST00000566372 1715 ntBASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 AC092919.2-201ENST00000623631 1645 ntBASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 AC025580.3-201ENST00000617932 1424 ntBASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPF3BQ9BZI7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 AC064836.3-201ENST00000607928 673 ntBASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 AC004877.2-201ENST00000623941 599 ntBASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.49■□□□□ 0.71
UPF3BQ9BZI7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 AC145285.3-201ENST00000564603 959 ntBASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 AC023141.13-201ENST00000604991 943 ntBASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 AL355385.1-201ENST00000606123 409 ntBASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 AL691403.2-201ENST00000618460 490 ntBASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF3BQ9BZI7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms