Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP3-1Q9BYR8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.08
KRTAP3-1Q9BYR8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP3-1Q9BYR8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.08
KRTAP3-1Q9BYR8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP3-1Q9BYR8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP3-1Q9BYR8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP3-1Q9BYR8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
KRTAP3-1Q9BYR8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 CICP13-201ENST00000422015 2789 ntBASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 CICP24-201ENST00000605464 2705 ntBASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 PCED1CP-201ENST00000419887 785 ntBASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AL117351.1-201ENST00000438864 766 ntBASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC087641.1-201ENST00000557561 1021 ntBASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC012615.1-201ENST00000565797 1299 ntBASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC006927.4-201ENST00000639187 543 ntBASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 AC138035.3-201ENST00000622706 2791 ntBASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP3-1Q9BYR8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC9A3P2-201ENST00000447821 2021 ntBASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 TMBIM7P-203ENST00000641617 1718 ntBASIC8.32□□□□□ -1.08
KRTAP3-1Q9BYR8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms