Protein–RNA interactions for Protein: Q9BV87

CNPPD1, Protein CNPPD1, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1Q9BV87 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 UPF3AP3-201ENST00000420996 769 ntBASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 AC140658.5-201ENST00000438532 169 ntBASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 AC112482.1-201ENST00000492080 688 ntBASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 AL078644.1-201ENST00000609881 752 ntBASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 MST1L-201ENST00000442552 2185 ntBASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CNPPD1Q9BV87 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 RPSAP43-201ENST00000402237 625 ntBASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 MCCD1P2-201ENST00000423228 335 ntBASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 FAM58CP-201ENST00000435741 640 ntBASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 HLA-J-202ENST00000469281 1241 ntBASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 AC112191.1-201ENST00000523689 701 ntBASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 MTDHP5-201ENST00000598980 586 ntBASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 AL009183.1-201ENST00000603760 355 ntBASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 AL691403.2-201ENST00000618460 490 ntBASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 AC105917.1-201ENST00000506637 2539 ntBASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CNPPD1Q9BV87 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 AL512652.2-201ENST00000625156 1716 ntBASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CNPPD1Q9BV87 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms