Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 KRT18P28-201ENST00000453838 1332 ntBASIC11.43□□□□□ -0.58
UPK3BQ9BT76 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
UPK3BQ9BT76 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.42□□□□□ -0.58
UPK3BQ9BT76 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.42□□□□□ -0.58
UPK3BQ9BT76 AL627223.1-201ENST00000416693 442 ntBASIC11.42□□□□□ -0.58
UPK3BQ9BT76 TSEN15P1-201ENST00000423257 515 ntBASIC11.42□□□□□ -0.58
UPK3BQ9BT76 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms