Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 AP000344.2-201ENST00000512987 629 ntBASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 FAM86C2P-203ENST00000528684 1004 ntBASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 AL161645.1-201ENST00000622716 1255 ntBASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 TCAF2P1-201ENST00000291129 2421 ntBASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCGF1Q9BSM1 LINC00895-201ENST00000629028 1637 ntBASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 AL355306.1-201ENST00000415580 579 ntBASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 PMS2P2-201ENST00000425039 1128 ntBASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 AL009183.1-201ENST00000603760 355 ntBASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 AC004835.2-201ENST00000603762 682 ntBASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 AL031055.1-201ENST00000606362 631 ntBASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 AC026120.1-201ENST00000611536 926 ntBASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCGF1Q9BSM1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PCGF1Q9BSM1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms