Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 AC087499.5-201ENST00000452760 1342 ntBASIC18.94■□□□□ 0.62
SLF1Q9BQI6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.94■□□□□ 0.62
SLF1Q9BQI6 CROCCP1-201ENST00000426910 5675 ntBASIC18.94■□□□□ 0.62
SLF1Q9BQI6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 AL079307.3-201ENST00000556114 283 ntBASIC18.93■□□□□ 0.62
SLF1Q9BQI6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 AC024267.1-201ENST00000582320 895 ntBASIC18.93■□□□□ 0.62
SLF1Q9BQI6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 AL844908.2-201ENST00000609461 460 ntBASIC18.93■□□□□ 0.62
SLF1Q9BQI6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 AC079328.2-201ENST00000561241 3354 ntBASIC18.93■□□□□ 0.62
SLF1Q9BQI6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLF1Q9BQI6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 AL080243.2-201ENST00000418783 582 ntBASIC18.92■□□□□ 0.62
SLF1Q9BQI6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 CRB3P1-201ENST00000449338 276 ntBASIC18.92■□□□□ 0.62
SLF1Q9BQI6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.92■□□□□ 0.62
SLF1Q9BQI6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLF1Q9BQI6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLF1Q9BQI6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLF1Q9BQI6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.91■□□□□ 0.62
SLF1Q9BQI6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SLF1Q9BQI6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLF1Q9BQI6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLF1Q9BQI6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SLF1Q9BQI6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms