Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 INGX-201ENST00000359239 846 ntBASIC15.43■□□□□ 0.06
NR1H4Q96RI1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 AC006504.5-208ENST00000588784 2401 ntBASIC15.43■□□□□ 0.06
NR1H4Q96RI1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.43■□□□□ 0.06
NR1H4Q96RI1 AC097374.2-201ENST00000618617 1306 ntBASIC15.43■□□□□ 0.06
NR1H4Q96RI1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 REXO1L2P-201ENST00000425429 2069 ntBASIC15.42■□□□□ 0.06
NR1H4Q96RI1 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H4Q96RI1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H4Q96RI1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms