Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG4P5Q96PW8 AC008677.1-201ENST00000519230 1561 ntBASIC16.81■□□□□ 0.28
CSPG4P5Q96PW8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG4P5Q96PW8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CSPG4P5Q96PW8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 MIR346-201ENST00000362234 95 ntBASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 BX842568.4-201ENST00000421222 227 ntBASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 CEND1P1-201ENST00000451006 455 ntBASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 AC245100.5-201ENST00000452108 331 ntBASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 AP000842.3-202ENST00000569238 1080 ntBASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.8■□□□□ 0.28
CSPG4P5Q96PW8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 GPX1P2-201ENST00000429271 606 ntBASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 MIR4469-201ENST00000583919 79 ntBASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 AC010327.4-202ENST00000591484 748 ntBASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSPG4P5Q96PW8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.78■□□□□ 0.28
CSPG4P5Q96PW8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.78■□□□□ 0.28
CSPG4P5Q96PW8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.78■□□□□ 0.28
CSPG4P5Q96PW8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG4P5Q96PW8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
CSPG4P5Q96PW8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSPG4P5Q96PW8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms