Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 HLA-J-202ENST00000469281 1241 ntBASIC13.28□□□□□ -0.28
ZNF48Q96MX3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 AC013467.2-201ENST00000605472 835 ntBASIC13.28□□□□□ -0.28
ZNF48Q96MX3 SPTSSB-204ENST00000617024 1292 ntBASIC13.28□□□□□ -0.28
ZNF48Q96MX3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 AC022144.1-201ENST00000602255 1580 ntBASIC13.28□□□□□ -0.28
ZNF48Q96MX3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF48Q96MX3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF48Q96MX3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF48Q96MX3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ZNF48Q96MX3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF48Q96MX3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.27□□□□□ -0.28
ZNF48Q96MX3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF48Q96MX3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF48Q96MX3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF48Q96MX3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.27□□□□□ -0.29
ZNF48Q96MX3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 HLA-V-204ENST00000476601 1289 ntBASIC13.27□□□□□ -0.29
ZNF48Q96MX3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 AL662844.4-201ENST00000606367 2838 ntBASIC13.27□□□□□ -0.29
ZNF48Q96MX3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF48Q96MX3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms