Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 HLA-H-201ENST00000383620 1096 ntBASIC14.68□□□□□ -0.06
CPNE4Q96A23 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.68□□□□□ -0.06
CPNE4Q96A23 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE4Q96A23 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 ME2P1-201ENST00000426028 1970 ntBASIC14.67□□□□□ -0.06
CPNE4Q96A23 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 AC092171.3-201ENST00000610122 2651 ntBASIC14.67□□□□□ -0.06
CPNE4Q96A23 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 RBPMS2P1-201ENST00000437762 623 ntBASIC14.67□□□□□ -0.06
CPNE4Q96A23 HLA-J-203ENST00000494367 1087 ntBASIC14.67□□□□□ -0.06
CPNE4Q96A23 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 LINC00628-201ENST00000628516 1289 ntBASIC14.67□□□□□ -0.06
CPNE4Q96A23 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CPNE4Q96A23 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE4Q96A23 KRT18P28-201ENST00000453838 1332 ntBASIC14.66□□□□□ -0.06
CPNE4Q96A23 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE4Q96A23 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE4Q96A23 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CPNE4Q96A23 AC005622.1-201ENST00000636801 1703 ntBASIC14.66□□□□□ -0.06
CPNE4Q96A23 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE4Q96A23 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE4Q96A23 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE4Q96A23 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE4Q96A23 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE4Q96A23 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CPNE4Q96A23 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE4Q96A23 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE4Q96A23 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE4Q96A23 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE4Q96A23 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE4Q96A23 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CPNE4Q96A23 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE4Q96A23 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE4Q96A23 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms