Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF34Q969K3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF34Q969K3 ME2P1-201ENST00000426028 1970 ntBASIC17.09■□□□□ 0.33
RNF34Q969K3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF34Q969K3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF34Q969K3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF34Q969K3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF34Q969K3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF34Q969K3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF34Q969K3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF34Q969K3 KRT18P32-201ENST00000424695 1287 ntBASIC17.09■□□□□ 0.33
RNF34Q969K3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF34Q969K3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF34Q969K3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF34Q969K3 POU5F1P6-201ENST00000466990 990 ntBASIC17.09■□□□□ 0.33
RNF34Q969K3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF34Q969K3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF34Q969K3 AC105233.2-201ENST00000523697 349 ntBASIC17.09■□□□□ 0.33
RNF34Q969K3 AF228730.5-201ENST00000530288 346 ntBASIC17.09■□□□□ 0.33
RNF34Q969K3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF34Q969K3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF34Q969K3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF34Q969K3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RNF34Q969K3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF34Q969K3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF34Q969K3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF34Q969K3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RNF34Q969K3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF34Q969K3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RNF34Q969K3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
RNF34Q969K3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF34Q969K3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF34Q969K3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF34Q969K3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF34Q969K3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF34Q969K3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF34Q969K3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF34Q969K3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF34Q969K3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RNF34Q969K3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF34Q969K3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF34Q969K3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RNF34Q969K3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF34Q969K3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF34Q969K3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF34Q969K3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RNF34Q969K3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF34Q969K3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF34Q969K3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF34Q969K3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF34Q969K3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RNF34Q969K3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF34Q969K3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
RNF34Q969K3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF34Q969K3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RNF34Q969K3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF34Q969K3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF34Q969K3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF34Q969K3 AC069335.1-201ENST00000489972 472 ntBASIC17.08■□□□□ 0.32
RNF34Q969K3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RNF34Q969K3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.08■□□□□ 0.32
RNF34Q969K3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF34Q969K3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF34Q969K3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 AP001160.2-201ENST00000596071 487 ntBASIC17.08■□□□□ 0.32
RNF34Q969K3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF34Q969K3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF34Q969K3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF34Q969K3 AC067930.6-201ENST00000623257 4947 ntBASIC17.08■□□□□ 0.32
RNF34Q969K3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF34Q969K3 AC092364.2-201ENST00000596710 2692 ntBASIC17.08■□□□□ 0.32
RNF34Q969K3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF34Q969K3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF34Q969K3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF34Q969K3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms