Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14□□□□□ -0.17
USP9XQ93008 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
USP9XQ93008 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14□□□□□ -0.17
USP9XQ93008 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14□□□□□ -0.17
USP9XQ93008 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14□□□□□ -0.17
USP9XQ93008 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14□□□□□ -0.17
USP9XQ93008 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 AC008267.1-201ENST00000474858 1069 ntBASIC14□□□□□ -0.17
USP9XQ93008 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 AP001505.2-201ENST00000616815 443 ntBASIC14□□□□□ -0.17
USP9XQ93008 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14□□□□□ -0.17
USP9XQ93008 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 AL031731.1-201ENST00000642131 2094 ntBASIC14□□□□□ -0.17
USP9XQ93008 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
USP9XQ93008 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
USP9XQ93008 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.99□□□□□ -0.17
USP9XQ93008 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.99□□□□□ -0.17
USP9XQ93008 RPSAP36-202ENST00000494591 1261 ntBASIC13.99□□□□□ -0.17
USP9XQ93008 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
USP9XQ93008 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.99□□□□□ -0.17
USP9XQ93008 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.99□□□□□ -0.17
USP9XQ93008 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
USP9XQ93008 AC090164.3-201ENST00000610780 2143 ntBASIC13.99□□□□□ -0.17
USP9XQ93008 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.99□□□□□ -0.17
USP9XQ93008 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
USP9XQ93008 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
USP9XQ93008 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 TUBB8P12-201ENST00000308911 1335 ntBASIC13.99□□□□□ -0.17
USP9XQ93008 TUBB7P-202ENST00000428444 1305 ntBASIC13.99□□□□□ -0.17
USP9XQ93008 TUBB8P7-204ENST00000567960 1332 ntBASIC13.99□□□□□ -0.17
USP9XQ93008 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 AC015818.8-201ENST00000587907 1519 ntBASIC13.99□□□□□ -0.17
USP9XQ93008 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
USP9XQ93008 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.99□□□□□ -0.17
USP9XQ93008 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.99□□□□□ -0.17
USP9XQ93008 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.99□□□□□ -0.17
USP9XQ93008 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
USP9XQ93008 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
USP9XQ93008 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 GGT4P-201ENST00000623672 1708 ntBASIC13.98□□□□□ -0.17
USP9XQ93008 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
USP9XQ93008 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.98□□□□□ -0.17
USP9XQ93008 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.98□□□□□ -0.17
USP9XQ93008 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.98□□□□□ -0.17
USP9XQ93008 AC069218.1-201ENST00000435269 762 ntBASIC13.98□□□□□ -0.17
USP9XQ93008 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.98□□□□□ -0.17
USP9XQ93008 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.98□□□□□ -0.17
USP9XQ93008 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.98□□□□□ -0.17
USP9XQ93008 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.98□□□□□ -0.17
USP9XQ93008 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
USP9XQ93008 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
USP9XQ93008 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
USP9XQ93008 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms