Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 AP003680.1-201ENST00000598970 3660 ntBASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 HAUS4P1-201ENST00000406739 1145 ntBASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 PMS2P4-201ENST00000412466 1052 ntBASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 AL356488.2-201ENST00000602755 427 ntBASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC44A1Q8WWI5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 TMBIM7P-203ENST00000641617 1718 ntBASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 AC093724.1-201ENST00000448659 1027 ntBASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 AC108073.2-201ENST00000464002 357 ntBASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 PRELID1P1-202ENST00000567272 903 ntBASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC44A1Q8WWI5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC44A1Q8WWI5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms