Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 MST1L-201ENST00000442552 2185 ntBASIC15.22■□□□□ 0.03
NEIL3Q8TAT5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEIL3Q8TAT5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.22■□□□□ 0.03
NEIL3Q8TAT5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.22■□□□□ 0.03
NEIL3Q8TAT5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEIL3Q8TAT5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NEIL3Q8TAT5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NEIL3Q8TAT5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 DUX4L17-201ENST00000557360 1267 ntBASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 AC105339.1-204ENST00000636249 355 ntBASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.21■□□□□ 0.03
NEIL3Q8TAT5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NEIL3Q8TAT5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NEIL3Q8TAT5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
NEIL3Q8TAT5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.21■□□□□ 0.02
NEIL3Q8TAT5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.21■□□□□ 0.02
NEIL3Q8TAT5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NEIL3Q8TAT5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
NEIL3Q8TAT5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NEIL3Q8TAT5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
NEIL3Q8TAT5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
NEIL3Q8TAT5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 AC024909.3-201ENST00000611513 2257 ntBASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 KRT8P49-201ENST00000604166 1432 ntBASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 AL355306.1-201ENST00000415580 579 ntBASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 AL671277.1-201ENST00000429656 993 ntBASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 METTL21AP1-201ENST00000438852 635 ntBASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 AC087641.1-201ENST00000557561 1021 ntBASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 AC004835.2-201ENST00000603762 682 ntBASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.2■□□□□ 0.02
NEIL3Q8TAT5 AC099522.2-201ENST00000607001 744 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms