Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 GPS2P2-201ENST00000430745 888 ntBASIC17.41■□□□□ 0.38
LMO3Q8TAP4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 IGHV3-62-201ENST00000520057 340 ntBASIC17.41■□□□□ 0.38
LMO3Q8TAP4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 HLA-H-201ENST00000383620 1096 ntBASIC17.4■□□□□ 0.38
LMO3Q8TAP4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 AL136982.4-201ENST00000437689 1740 ntBASIC17.4■□□□□ 0.38
LMO3Q8TAP4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 UXT-AS1-201ENST00000590504 1525 ntBASIC17.4■□□□□ 0.38
LMO3Q8TAP4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LMO3Q8TAP4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LMO3Q8TAP4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LMO3Q8TAP4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LMO3Q8TAP4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LMO3Q8TAP4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LMO3Q8TAP4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LMO3Q8TAP4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 RNA5SP410-201ENST00000516285 106 ntBASIC17.39■□□□□ 0.37
LMO3Q8TAP4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 BNIP3P1-202ENST00000550043 1585 ntBASIC17.39■□□□□ 0.37
LMO3Q8TAP4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LMO3Q8TAP4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 AL627223.1-201ENST00000416693 442 ntBASIC17.38■□□□□ 0.37
LMO3Q8TAP4 RPS8P6-201ENST00000426177 609 ntBASIC17.38■□□□□ 0.37
LMO3Q8TAP4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.38■□□□□ 0.37
LMO3Q8TAP4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms