Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NUP35Q8NFH5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NUP35Q8NFH5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NUP35Q8NFH5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NUP35Q8NFH5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
NUP35Q8NFH5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NUP35Q8NFH5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NUP35Q8NFH5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 AC232323.1-201ENST00000540724 2099 ntBASIC12.25□□□□□ -0.45
NUP35Q8NFH5 REXO1L5P-201ENST00000622260 2098 ntBASIC12.25□□□□□ -0.45
NUP35Q8NFH5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 NAPSB-206ENST00000562112 1266 ntBASIC12.25□□□□□ -0.45
NUP35Q8NFH5 TERC-201ENST00000602385 541 ntBASIC12.25□□□□□ -0.45
NUP35Q8NFH5 AC140113.3-201ENST00000605663 199 ntBASIC12.25□□□□□ -0.45
NUP35Q8NFH5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 AC243591.1-201ENST00000452967 1364 ntBASIC12.25□□□□□ -0.45
NUP35Q8NFH5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 Z83836.1-201ENST00000624605 1642 ntBASIC12.25□□□□□ -0.45
NUP35Q8NFH5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 AC007686.3-201ENST00000619017 3487 ntBASIC12.25□□□□□ -0.45
NUP35Q8NFH5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NUP35Q8NFH5 LINC00552-201ENST00000625151 2579 ntBASIC12.25□□□□□ -0.45
NUP35Q8NFH5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.24□□□□□ -0.45
NUP35Q8NFH5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms