Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC109635.5-201ENST00000533593 962 ntBASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 MIR3909-201ENST00000579518 119 ntBASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 AC002347.1-201ENST00000569543 541 ntBASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 AC021097.1-201ENST00000607902 574 ntBASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 AC092902.6-201ENST00000641783 218 ntBASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 REXO1L8P-201ENST00000604378 1897 ntBASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SIMC1Q8NDZ2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 YBX2P1-201ENST00000394192 760 ntBASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 MCCD1P2-201ENST00000423228 335 ntBASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 AC004832.2-201ENST00000426397 482 ntBASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 FAM58CP-201ENST00000435741 640 ntBASIC15.41■□□□□ 0.06
SIMC1Q8NDZ2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms