Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 AL596087.1-201ENST00000400979 1969 ntBASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 AL139010.1-201ENST00000454878 894 ntBASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 AC125807.1-201ENST00000483097 614 ntBASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 BANF1P1-201ENST00000553684 263 ntBASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 AC079328.2-201ENST00000561241 3354 ntBASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 MIR648-201ENST00000385046 94 ntBASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 AC107890.1-201ENST00000422478 521 ntBASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 RFPL4AP1-201ENST00000530883 850 ntBASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 AC099398.1-201ENST00000567919 2776 ntBASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAM1L1Q8N609 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 PCDHB19P-201ENST00000570871 2371 ntBASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAM1L1Q8N609 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms