Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AKAP8P1-201ENST00000434743 1349 ntBASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 UXT-AS1-201ENST00000590504 1525 ntBASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 SPCS2P4-201ENST00000436160 681 ntBASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 CNN2P2-201ENST00000443536 909 ntBASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 CNN2P3-201ENST00000450201 906 ntBASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 IGHV3-62-201ENST00000520057 340 ntBASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 AC138761.1-201ENST00000584393 385 ntBASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 AL136317.3-201ENST00000618497 906 ntBASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC33Q8N5R6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 AL009183.1-201ENST00000603760 355 ntBASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC33Q8N5R6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC33Q8N5R6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.14■□□□□ 0.34
CCDC33Q8N5R6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 AC011270.2-201ENST00000624293 2550 ntBASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC33Q8N5R6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms