Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 AC092474.2-201ENST00000424288 719 ntBASIC15.12■□□□□ 0.01
VRK2Q86Y07 RPL13AP23-201ENST00000480739 586 ntBASIC15.12■□□□□ 0.01
VRK2Q86Y07 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 AC109635.5-201ENST00000533593 962 ntBASIC15.12■□□□□ 0.01
VRK2Q86Y07 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 AL121894.2-201ENST00000602977 491 ntBASIC15.12■□□□□ 0.01
VRK2Q86Y07 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 AC016027.1-202ENST00000607927 1699 ntBASIC15.12■□□□□ 0.01
VRK2Q86Y07 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK2Q86Y07 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK2Q86Y07 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 MIR648-201ENST00000385046 94 ntBASIC15.11■□□□□ 0.01
VRK2Q86Y07 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 AC140658.5-201ENST00000438532 169 ntBASIC15.11■□□□□ 0.01
VRK2Q86Y07 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 AC093724.1-201ENST00000448659 1027 ntBASIC15.11■□□□□ 0.01
VRK2Q86Y07 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 KRT19P2-202ENST00000557173 1012 ntBASIC15.11■□□□□ 0.01
VRK2Q86Y07 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 AL078644.1-201ENST00000609881 752 ntBASIC15.11■□□□□ 0.01
VRK2Q86Y07 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 IL9RP2-201ENST00000423948 1312 ntBASIC15.11■□□□□ 0.01
VRK2Q86Y07 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK2Q86Y07 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VRK2Q86Y07 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VRK2Q86Y07 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.1■□□□□ 0.01
VRK2Q86Y07 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms