Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 AL136982.4-201ENST00000437689 1740 ntBASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 AZGP1P1-201ENST00000411909 902 ntBASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 RPS2P32-201ENST00000439199 892 ntBASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 AC025048.3-201ENST00000590609 569 ntBASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 AC005702.4-201ENST00000618393 416 ntBASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAI1Q7Z5J4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 AC123567.1-201ENST00000548294 1261 ntBASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 CTBP2P3-201ENST00000585629 1255 ntBASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 MIR6805-201ENST00000615055 62 ntBASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 AC087499.6-201ENST00000411576 835 ntBASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 RPSAP52-203ENST00000622976 1023 ntBASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
RAI1Q7Z5J4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAI1Q7Z5J4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAI1Q7Z5J4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAI1Q7Z5J4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAI1Q7Z5J4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAI1Q7Z5J4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RAI1Q7Z5J4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RAI1Q7Z5J4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
RAI1Q7Z5J4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms