Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 AC234782.1-201ENST00000451950 919 ntBASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 NPM1P43-201ENST00000558669 786 ntBASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 BNIP3P1-202ENST00000550043 1585 ntBASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 AC087289.5-201ENST00000586076 3175 ntBASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 ACTG1P2-201ENST00000415776 1125 ntBASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 AL008707.1-201ENST00000422498 534 ntBASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 ACTG1P11-201ENST00000425411 1125 ntBASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RGPD4Q7Z3J3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RGPD4Q7Z3J3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.14■□□□□ 0.82
RGPD4Q7Z3J3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RGPD4Q7Z3J3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
RGPD4Q7Z3J3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.14■□□□□ 0.82
RGPD4Q7Z3J3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RGPD4Q7Z3J3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 AC092068.3-201ENST00000587894 2016 ntBASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 LETM1P2-201ENST00000597330 2178 ntBASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RGPD4Q7Z3J3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 GAPDHP40-201ENST00000505218 1006 ntBASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 AC007663.3-201ENST00000609632 465 ntBASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 YRDCP1-201ENST00000621419 643 ntBASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 AC005622.1-201ENST00000636801 1703 ntBASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 AP003171.2-201ENST00000528208 925 ntBASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 RN7SL736P-201ENST00000613111 269 ntBASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RGPD4Q7Z3J3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms