Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LCA10Q71F78 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LCA10Q71F78 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
LCA10Q71F78 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
LCA10Q71F78 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC8.88□□□□□ -0.99
LCA10Q71F78 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
LCA10Q71F78 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LCA10Q71F78 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC8.88□□□□□ -0.99
LCA10Q71F78 C2-206ENST00000442278 2434 ntTSL 2 BASIC8.88□□□□□ -0.99
LCA10Q71F78 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
LCA10Q71F78 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 SON-203ENST00000381679 7860 ntTSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 SLC6A6P1-201ENST00000413933 1850 ntBASIC8.87□□□□□ -0.99
LCA10Q71F78 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 AC022898.2-201ENST00000616822 1312 ntBASIC8.87□□□□□ -0.99
LCA10Q71F78 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
LCA10Q71F78 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
LCA10Q71F78 UNC93B2-201ENST00000285383 730 ntBASIC8.87□□□□□ -0.99
LCA10Q71F78 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC8.87□□□□□ -0.99
LCA10Q71F78 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC8.87□□□□□ -0.99
LCA10Q71F78 PHB2-202ENST00000440277 996 ntTSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 UBE2SP1-201ENST00000450587 669 ntBASIC8.87□□□□□ -0.99
LCA10Q71F78 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 DUTP2-201ENST00000519164 463 ntBASIC8.87□□□□□ -0.99
LCA10Q71F78 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC8.87□□□□□ -0.99
LCA10Q71F78 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC8.87□□□□□ -0.99
LCA10Q71F78 AC233702.5-201ENST00000584107 538 ntBASIC8.87□□□□□ -0.99
LCA10Q71F78 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 AC010240.3-201ENST00000607688 395 ntBASIC8.87□□□□□ -0.99
LCA10Q71F78 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC8.87□□□□□ -0.99
LCA10Q71F78 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 MECR-202ENST00000373791 2416 ntTSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 LINC02012-201ENST00000608206 1725 ntBASIC8.87□□□□□ -0.99
LCA10Q71F78 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 ALK-205ENST00000618119 4646 ntTSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 ABR-228ENST00000574437 3196 ntTSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
LCA10Q71F78 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC8.87□□□□□ -0.99
LCA10Q71F78 BLK-205ENST00000529894 2017 ntTSL 5 BASIC8.87□□□□□ -0.99
LCA10Q71F78 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LCA10Q71F78 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC8.86□□□□□ -0.99
LCA10Q71F78 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms