Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
DCLRE1AQ6PJP8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCLRE1AQ6PJP8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCLRE1AQ6PJP8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DCLRE1AQ6PJP8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.37■□□□□ 0.37
DCLRE1AQ6PJP8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCLRE1AQ6PJP8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.37■□□□□ 0.37
DCLRE1AQ6PJP8 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.37■□□□□ 0.37
DCLRE1AQ6PJP8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.37■□□□□ 0.37
DCLRE1AQ6PJP8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 AC011676.5-201ENST00000624864 2660 ntBASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 MEIS3P1-201ENST00000495167 958 ntBASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 AL359881.2-201ENST00000602973 570 ntBASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 AC004840.1-201ENST00000636359 365 ntBASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.36■□□□□ 0.37
DCLRE1AQ6PJP8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 AC135586.1-201ENST00000539323 574 ntBASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 MIR6069-201ENST00000620069 79 ntBASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 AC025048.6-201ENST00000634326 1161 ntBASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 AL592424.1-201ENST00000563624 1536 ntBASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 FLJ38576-201ENST00000623820 2459 ntBASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
DCLRE1AQ6PJP8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DCLRE1AQ6PJP8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms