Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 KRT18P2-201ENST00000447938 1258 ntBASIC14.9□□□□□ -0.02
NIPAL3Q6P499 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 AC023141.13-201ENST00000604991 943 ntBASIC14.9□□□□□ -0.02
NIPAL3Q6P499 FAM197Y3-203ENST00000618346 717 ntBASIC14.9□□□□□ -0.02
NIPAL3Q6P499 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 BCAR1-209ENST00000546196 1340 ntBASIC14.9□□□□□ -0.02
NIPAL3Q6P499 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NIPAL3Q6P499 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 RHOQP3-201ENST00000437982 621 ntBASIC14.89□□□□□ -0.03
NIPAL3Q6P499 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 AC004877.2-201ENST00000623941 599 ntBASIC14.89□□□□□ -0.03
NIPAL3Q6P499 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.89□□□□□ -0.03
NIPAL3Q6P499 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms