Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 LINC01144-201ENST00000626198 1710 ntBASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.87■□□□□ 0.13
LYSMD4Q5XG99 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 BRWD1P1-201ENST00000401091 371 ntBASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 ACTG1P3-201ENST00000431775 1114 ntBASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 AL583810.1-201ENST00000553344 1045 ntBASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 AC084346.2-201ENST00000607097 949 ntBASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 AL391069.4-201ENST00000609583 481 ntBASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LYSMD4Q5XG99 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms