Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 AC098859.1-201ENST00000502915 1238 ntBASIC16.92■□□□□ 0.3
LRRC38Q5VT99 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 RARRES2P8-201ENST00000566335 367 ntBASIC16.92■□□□□ 0.3
LRRC38Q5VT99 AC106730.1-201ENST00000566722 1090 ntBASIC16.92■□□□□ 0.3
LRRC38Q5VT99 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 AC027601.4-201ENST00000611259 610 ntBASIC16.92■□□□□ 0.3
LRRC38Q5VT99 FAM197Y3-203ENST00000618346 717 ntBASIC16.92■□□□□ 0.3
LRRC38Q5VT99 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 AKAP8P1-201ENST00000434743 1349 ntBASIC16.92■□□□□ 0.3
LRRC38Q5VT99 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRRC38Q5VT99 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC38Q5VT99 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC38Q5VT99 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms