Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 AC025048.6-201ENST00000634326 1161 ntBASIC17.22■□□□□ 0.35
VARS2Q5ST30 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 AC007541.1-201ENST00000570282 1469 ntBASIC17.21■□□□□ 0.35
VARS2Q5ST30 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 NME2P1-201ENST00000426182 414 ntBASIC17.21■□□□□ 0.35
VARS2Q5ST30 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 AL132655.2-201ENST00000596276 594 ntBASIC17.21■□□□□ 0.35
VARS2Q5ST30 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.21■□□□□ 0.35
VARS2Q5ST30 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VARS2Q5ST30 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
VARS2Q5ST30 AL136982.4-201ENST00000437689 1740 ntBASIC17.21■□□□□ 0.35
VARS2Q5ST30 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VARS2Q5ST30 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.21■□□□□ 0.34
VARS2Q5ST30 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
VARS2Q5ST30 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 GNAQP1-201ENST00000444815 1067 ntBASIC17.2■□□□□ 0.34
VARS2Q5ST30 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 AC004790.1-201ENST00000612686 536 ntBASIC17.2■□□□□ 0.34
VARS2Q5ST30 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
VARS2Q5ST30 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VARS2Q5ST30 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms