Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USH1GQ495M9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USH1GQ495M9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USH1GQ495M9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
USH1GQ495M9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USH1GQ495M9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
USH1GQ495M9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USH1GQ495M9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USH1GQ495M9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.67■□□□□ 0.58
USH1GQ495M9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.67■□□□□ 0.58
USH1GQ495M9 POU5F1P6-201ENST00000466990 990 ntBASIC18.67■□□□□ 0.58
USH1GQ495M9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.67■□□□□ 0.58
USH1GQ495M9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.67■□□□□ 0.58
USH1GQ495M9 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.67■□□□□ 0.58
USH1GQ495M9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.67■□□□□ 0.58
USH1GQ495M9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
USH1GQ495M9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USH1GQ495M9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
USH1GQ495M9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.67■□□□□ 0.58
USH1GQ495M9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
USH1GQ495M9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USH1GQ495M9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.67■□□□□ 0.58
USH1GQ495M9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
USH1GQ495M9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
USH1GQ495M9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
USH1GQ495M9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
USH1GQ495M9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.66■□□□□ 0.58
USH1GQ495M9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USH1GQ495M9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.66■□□□□ 0.58
USH1GQ495M9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.66■□□□□ 0.58
USH1GQ495M9 AC009053.2-201ENST00000563701 2365 ntBASIC18.66■□□□□ 0.58
USH1GQ495M9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
USH1GQ495M9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.66■□□□□ 0.58
USH1GQ495M9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.66■□□□□ 0.58
USH1GQ495M9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.66■□□□□ 0.58
USH1GQ495M9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.66■□□□□ 0.58
USH1GQ495M9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.66■□□□□ 0.58
USH1GQ495M9 TERF1P3-201ENST00000505638 1227 ntBASIC18.66■□□□□ 0.58
USH1GQ495M9 SERBP1P5-201ENST00000510079 1181 ntBASIC18.66■□□□□ 0.58
USH1GQ495M9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 AC026979.3-201ENST00000607315 403 ntBASIC18.66■□□□□ 0.58
USH1GQ495M9 AC008761.3-201ENST00000624803 892 ntBASIC18.66■□□□□ 0.58
USH1GQ495M9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USH1GQ495M9 REXO1L8P-201ENST00000604378 1897 ntBASIC18.66■□□□□ 0.58
USH1GQ495M9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USH1GQ495M9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.65■□□□□ 0.58
USH1GQ495M9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USH1GQ495M9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.65■□□□□ 0.58
USH1GQ495M9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
USH1GQ495M9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
USH1GQ495M9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USH1GQ495M9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.65■□□□□ 0.58
USH1GQ495M9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.65■□□□□ 0.58
USH1GQ495M9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.65■□□□□ 0.58
USH1GQ495M9 MIR4321-201ENST00000592276 80 ntBASIC18.65■□□□□ 0.58
USH1GQ495M9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.65■□□□□ 0.58
USH1GQ495M9 AL844908.2-201ENST00000609461 460 ntBASIC18.65■□□□□ 0.58
USH1GQ495M9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.65■□□□□ 0.58
USH1GQ495M9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USH1GQ495M9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.65■□□□□ 0.58
USH1GQ495M9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USH1GQ495M9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.65■□□□□ 0.58
USH1GQ495M9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.65■□□□□ 0.58
USH1GQ495M9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.65■□□□□ 0.58
USH1GQ495M9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USH1GQ495M9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms