Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 AL009178.2-201ENST00000597278 2719 ntBASIC12.58□□□□□ -0.4
HIST1H1AQ02539 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 AC006557.2-201ENST00000592985 1240 ntBASIC12.58□□□□□ -0.4
HIST1H1AQ02539 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 AL139011.1-202ENST00000642063 584 ntBASIC12.58□□□□□ -0.4
HIST1H1AQ02539 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1AQ02539 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 PTCHD3P3-201ENST00000403073 906 ntBASIC12.57□□□□□ -0.4
HIST1H1AQ02539 ELK2BP-201ENST00000415014 1224 ntBASIC12.57□□□□□ -0.4
HIST1H1AQ02539 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 AC004706.3-202ENST00000621574 984 ntBASIC12.57□□□□□ -0.4
HIST1H1AQ02539 AC012313.10-201ENST00000623509 926 ntBASIC12.57□□□□□ -0.4
HIST1H1AQ02539 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1AQ02539 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms