Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
HSPG2P98160 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC9.86□□□□□ -0.83
HSPG2P98160 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
HSPG2P98160 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC9.86□□□□□ -0.83
HSPG2P98160 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
HSPG2P98160 Z97180.1-201ENST00000445173 988 ntBASIC9.86□□□□□ -0.83
HSPG2P98160 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
HSPG2P98160 EEF1DP4-201ENST00000446006 880 ntBASIC9.86□□□□□ -0.83
HSPG2P98160 AC093813.1-201ENST00000605066 256 ntBASIC9.86□□□□□ -0.83
HSPG2P98160 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
HSPG2P98160 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC9.86□□□□□ -0.83
HSPG2P98160 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC9.86□□□□□ -0.83
HSPG2P98160 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC9.86□□□□□ -0.83
HSPG2P98160 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC9.86□□□□□ -0.83
HSPG2P98160 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC9.86□□□□□ -0.83
HSPG2P98160 DGAT2L7P-201ENST00000602462 744 ntBASIC9.86□□□□□ -0.83
HSPG2P98160 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
HSPG2P98160 AP001065.2-201ENST00000617205 644 ntBASIC9.86□□□□□ -0.83
HSPG2P98160 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC9.86□□□□□ -0.83
HSPG2P98160 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC9.86□□□□□ -0.83
HSPG2P98160 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
HSPG2P98160 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 PGGT1BP2-201ENST00000398621 1028 ntBASIC9.85□□□□□ -0.83
HSPG2P98160 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC9.85□□□□□ -0.83
HSPG2P98160 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 DNM1P30-201ENST00000563586 452 ntBASIC9.85□□□□□ -0.83
HSPG2P98160 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC9.85□□□□□ -0.83
HSPG2P98160 AC009084.3-201ENST00000623356 437 ntBASIC9.85□□□□□ -0.83
HSPG2P98160 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC9.85□□□□□ -0.83
HSPG2P98160 AL023775.1-201ENST00000454907 1746 ntBASIC9.85□□□□□ -0.83
HSPG2P98160 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 AC097065.1-201ENST00000425737 517 ntBASIC9.85□□□□□ -0.83
HSPG2P98160 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC9.85□□□□□ -0.83
HSPG2P98160 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC9.85□□□□□ -0.83
HSPG2P98160 AC022748.3-201ENST00000621828 275 ntBASIC9.85□□□□□ -0.83
HSPG2P98160 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
HSPG2P98160 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 RAC2-202ENST00000401529 569 ntTSL 4 BASIC9.85□□□□□ -0.83
HSPG2P98160 AL139008.1-201ENST00000437894 228 ntBASIC9.85□□□□□ -0.83
HSPG2P98160 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 TBCB-211ENST00000589996 724 ntTSL 3 BASIC9.85□□□□□ -0.83
HSPG2P98160 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC9.85□□□□□ -0.83
HSPG2P98160 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
HSPG2P98160 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
HSPG2P98160 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
HSPG2P98160 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
HSPG2P98160 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC9.85□□□□□ -0.83
HSPG2P98160 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC9.84□□□□□ -0.83
HSPG2P98160 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 AL645728.1-201ENST00000366221 2101 ntBASIC9.84□□□□□ -0.83
HSPG2P98160 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC9.84□□□□□ -0.83
HSPG2P98160 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC9.84□□□□□ -0.83
HSPG2P98160 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HSPG2P98160 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms