Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CBX1P83916 AC112693.3-201ENST00000624819 1983 ntBASIC17.1■□□□□ 0.33
CBX1P83916 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.1■□□□□ 0.33
CBX1P83916 AC026271.2-201ENST00000428091 497 ntBASIC17.1■□□□□ 0.33
CBX1P83916 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 AL162430.1-201ENST00000480705 870 ntBASIC17.1■□□□□ 0.33
CBX1P83916 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.1■□□□□ 0.33
CBX1P83916 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.1■□□□□ 0.33
CBX1P83916 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.1■□□□□ 0.33
CBX1P83916 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.1■□□□□ 0.33
CBX1P83916 AC022517.1-201ENST00000592429 346 ntBASIC17.1■□□□□ 0.33
CBX1P83916 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.1■□□□□ 0.33
CBX1P83916 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CBX1P83916 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX1P83916 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CBX1P83916 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 SLC29A4P1-201ENST00000398760 971 ntBASIC17.09■□□□□ 0.33
CBX1P83916 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 CROCCP5-201ENST00000436658 830 ntBASIC17.09■□□□□ 0.33
CBX1P83916 KRT18P65-201ENST00000439811 1286 ntBASIC17.09■□□□□ 0.33
CBX1P83916 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.09■□□□□ 0.33
CBX1P83916 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.09■□□□□ 0.33
CBX1P83916 AC069544.1-201ENST00000609399 999 ntBASIC17.09■□□□□ 0.33
CBX1P83916 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.09■□□□□ 0.33
CBX1P83916 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.09■□□□□ 0.33
CBX1P83916 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBX1P83916 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CBX1P83916 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CBX1P83916 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX1P83916 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CBX1P83916 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX1P83916 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CBX1P83916 C18orf15-201ENST00000623680 2534 ntBASIC17.08■□□□□ 0.33
CBX1P83916 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX1P83916 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX1P83916 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.08■□□□□ 0.33
CBX1P83916 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX1P83916 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.08■□□□□ 0.33
CBX1P83916 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CBX1P83916 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.08■□□□□ 0.33
CBX1P83916 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX1P83916 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CBX1P83916 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CBX1P83916 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
CBX1P83916 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.08■□□□□ 0.32
CBX1P83916 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.08■□□□□ 0.32
CBX1P83916 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.08■□□□□ 0.32
CBX1P83916 MIR4674-201ENST00000582457 87 ntBASIC17.08■□□□□ 0.32
CBX1P83916 AC008687.5-201ENST00000593746 558 ntBASIC17.08■□□□□ 0.32
CBX1P83916 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CBX1P83916 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC17.08■□□□□ 0.32
CBX1P83916 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CBX1P83916 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX1P83916 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CBX1P83916 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms