Protein–RNA interactions for Protein: P83105

HTRA4, Serine protease HTRA4, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4P83105 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTRA4P83105 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTRA4P83105 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTRA4P83105 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
HTRA4P83105 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HTRA4P83105 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTRA4P83105 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTRA4P83105 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HTRA4P83105 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HTRA4P83105 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 AC141586.5-201ENST00000624546 2050 ntBASIC17.09■□□□□ 0.33
HTRA4P83105 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.09■□□□□ 0.33
HTRA4P83105 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HTRA4P83105 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.09■□□□□ 0.33
HTRA4P83105 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.09■□□□□ 0.33
HTRA4P83105 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
HTRA4P83105 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 GPAA1P2-201ENST00000417923 928 ntBASIC17.09■□□□□ 0.33
HTRA4P83105 KRT18P64-201ENST00000434946 1219 ntBASIC17.09■□□□□ 0.33
HTRA4P83105 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.09■□□□□ 0.33
HTRA4P83105 ZNF767P-206ENST00000513792 565 ntBASIC17.09■□□□□ 0.33
HTRA4P83105 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 DUX4L45-201ENST00000566406 1057 ntBASIC17.09■□□□□ 0.33
HTRA4P83105 AP001063.1-201ENST00000568332 529 ntBASIC17.09■□□□□ 0.33
HTRA4P83105 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTRA4P83105 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.09■□□□□ 0.33
HTRA4P83105 AC010328.2-201ENST00000597698 1111 ntBASIC17.09■□□□□ 0.33
HTRA4P83105 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
HTRA4P83105 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.09■□□□□ 0.33
HTRA4P83105 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.09■□□□□ 0.33
HTRA4P83105 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.09■□□□□ 0.33
HTRA4P83105 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
HTRA4P83105 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTRA4P83105 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HTRA4P83105 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA4P83105 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA4P83105 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA4P83105 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA4P83105 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA4P83105 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.08■□□□□ 0.32
HTRA4P83105 BNIP3P1-202ENST00000550043 1585 ntBASIC17.08■□□□□ 0.32
HTRA4P83105 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 AL592424.1-201ENST00000563624 1536 ntBASIC17.08■□□□□ 0.32
HTRA4P83105 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 AC134312.5-201ENST00000568031 1313 ntBASIC17.08■□□□□ 0.32
HTRA4P83105 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.08■□□□□ 0.32
HTRA4P83105 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HTRA4P83105 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 AC026954.1-201ENST00000429771 1293 ntBASIC17.08■□□□□ 0.32
HTRA4P83105 GOLGA2P4-201ENST00000441462 777 ntBASIC17.08■□□□□ 0.32
HTRA4P83105 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.08■□□□□ 0.32
HTRA4P83105 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.08■□□□□ 0.32
HTRA4P83105 POU5F1P6-201ENST00000466990 990 ntBASIC17.08■□□□□ 0.32
HTRA4P83105 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.08■□□□□ 0.32
HTRA4P83105 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 AC005252.2-201ENST00000624630 1141 ntBASIC17.08■□□□□ 0.32
HTRA4P83105 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA4P83105 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.08■□□□□ 0.32
HTRA4P83105 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.07■□□□□ 0.32
HTRA4P83105 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.07■□□□□ 0.32
HTRA4P83105 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA4P83105 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
HTRA4P83105 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA4P83105 MSTO2P-201ENST00000314835 1709 ntBASIC17.07■□□□□ 0.32
HTRA4P83105 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA4P83105 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA4P83105 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.07■□□□□ 0.32
HTRA4P83105 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.07■□□□□ 0.32
HTRA4P83105 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.07■□□□□ 0.32
HTRA4P83105 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA4P83105 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA4P83105 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.07■□□□□ 0.32
HTRA4P83105 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA4P83105 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA4P83105 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HTRA4P83105 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HTRA4P83105 AC093433.1-201ENST00000458048 571 ntBASIC17.07■□□□□ 0.32
HTRA4P83105 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms