Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 MCCD1P2-201ENST00000423228 335 ntBASIC14.27□□□□□ -0.13
HIST1H3AP68431 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 AC040169.1-201ENST00000565382 521 ntBASIC14.27□□□□□ -0.13
HIST1H3AP68431 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 AC091812.2-201ENST00000619081 385 ntBASIC14.27□□□□□ -0.13
HIST1H3AP68431 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 LINC02447-202ENST00000501888 2146 ntBASIC14.27□□□□□ -0.13
HIST1H3AP68431 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 LINC02199-201ENST00000506655 2702 ntBASIC14.26□□□□□ -0.13
HIST1H3AP68431 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 AL355306.1-201ENST00000415580 579 ntBASIC14.26□□□□□ -0.13
HIST1H3AP68431 AC023274.1-201ENST00000418278 595 ntBASIC14.26□□□□□ -0.13
HIST1H3AP68431 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 ADH5P3-201ENST00000433842 1137 ntBASIC14.26□□□□□ -0.13
HIST1H3AP68431 KRT18P58-201ENST00000527480 1120 ntBASIC14.26□□□□□ -0.13
HIST1H3AP68431 AL138918.1-201ENST00000568306 659 ntBASIC14.26□□□□□ -0.13
HIST1H3AP68431 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.26□□□□□ -0.13
HIST1H3AP68431 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 MIR4321-201ENST00000592276 80 ntBASIC14.26□□□□□ -0.13
HIST1H3AP68431 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 AC092902.6-201ENST00000641783 218 ntBASIC14.26□□□□□ -0.13
HIST1H3AP68431 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H3AP68431 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H3AP68431 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H3AP68431 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H3AP68431 AC004832.2-201ENST00000426397 482 ntBASIC14.25□□□□□ -0.13
HIST1H3AP68431 AL671277.1-201ENST00000429656 993 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms