Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CICP13-201ENST00000422015 2789 ntBASIC14.92□□□□□ -0.02
CXCR4P61073 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCR4P61073 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CXCR4P61073 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
CXCR4P61073 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CXCR4P61073 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.92□□□□□ -0.02
CXCR4P61073 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 AP000867.3-201ENST00000524675 377 ntBASIC14.92□□□□□ -0.02
CXCR4P61073 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.92□□□□□ -0.02
CXCR4P61073 AL049597.2-201ENST00000565575 961 ntBASIC14.92□□□□□ -0.02
CXCR4P61073 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CXCR4P61073 AC092329.2-201ENST00000598402 547 ntBASIC14.92□□□□□ -0.02
CXCR4P61073 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 AC010331.1-201ENST00000611423 582 ntBASIC14.92□□□□□ -0.02
CXCR4P61073 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCR4P61073 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.92□□□□□ -0.02
CXCR4P61073 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.92□□□□□ -0.02
CXCR4P61073 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.92□□□□□ -0.02
CXCR4P61073 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CXCR4P61073 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CXCR4P61073 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCR4P61073 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCR4P61073 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCR4P61073 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 AP002414.2-201ENST00000591780 3365 ntBASIC14.91□□□□□ -0.02
CXCR4P61073 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CXCR4P61073 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CXCR4P61073 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CXCR4P61073 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 IER3-202ENST00000376377 1350 ntBASIC14.91□□□□□ -0.02
CXCR4P61073 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCR4P61073 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.91□□□□□ -0.02
CXCR4P61073 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 AC091167.2-201ENST00000579581 588 ntBASIC14.91□□□□□ -0.02
CXCR4P61073 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.91□□□□□ -0.02
CXCR4P61073 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCR4P61073 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCR4P61073 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCR4P61073 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CXCR4P61073 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCR4P61073 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCR4P61073 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CXCR4P61073 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCR4P61073 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CXCR4P61073 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CXCR4P61073 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms