Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN20P56880 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN20P56880 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CLDN20P56880 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
CLDN20P56880 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN20P56880 AL671277.1-201ENST00000429656 993 ntBASIC15.01□□□□□ -0.01
CLDN20P56880 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 ADH5P3-201ENST00000433842 1137 ntBASIC15.01□□□□□ -0.01
CLDN20P56880 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 DNAJB3-202ENST00000449667 1266 ntBASIC15.01□□□□□ -0.01
CLDN20P56880 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN20P56880 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN20P56880 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN20P56880 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN20P56880 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 AL596442.2-201ENST00000610240 980 ntBASIC15.01□□□□□ -0.01
CLDN20P56880 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN20P56880 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN20P56880 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN20P56880 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN20P56880 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN20P56880 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15□□□□□ -0.01
CLDN20P56880 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15□□□□□ -0.01
CLDN20P56880 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15□□□□□ -0.01
CLDN20P56880 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CLDN20P56880 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15□□□□□ -0.01
CLDN20P56880 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CLDN20P56880 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLDN20P56880 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLDN20P56880 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15□□□□□ -0.01
CLDN20P56880 AP006288.1-201ENST00000446065 395 ntBASIC15□□□□□ -0.01
CLDN20P56880 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 MIR3909-201ENST00000579518 119 ntBASIC15□□□□□ -0.01
CLDN20P56880 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15□□□□□ -0.01
CLDN20P56880 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15□□□□□ -0.01
CLDN20P56880 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLDN20P56880 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15□□□□□ -0.01
CLDN20P56880 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN20P56880 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15□□□□□ -0.01
CLDN20P56880 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CLDN20P56880 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CLDN20P56880 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN20P56880 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN20P56880 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CLDN20P56880 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms