Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF140P52738 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
ZNF140P52738 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF140P52738 KRT18P13-201ENST00000400056 1290 ntBASIC16.21■□□□□ 0.19
ZNF140P52738 AC005237.2-201ENST00000434368 219 ntBASIC16.21■□□□□ 0.19
ZNF140P52738 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF140P52738 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF140P52738 AP006288.1-201ENST00000446065 395 ntBASIC16.21■□□□□ 0.19
ZNF140P52738 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF140P52738 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF140P52738 RNA5SP410-201ENST00000516285 106 ntBASIC16.21■□□□□ 0.19
ZNF140P52738 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.21■□□□□ 0.19
ZNF140P52738 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF140P52738 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF140P52738 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF140P52738 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF140P52738 AC024267.1-201ENST00000582320 895 ntBASIC16.21■□□□□ 0.19
ZNF140P52738 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF140P52738 AC055717.3-201ENST00000622967 595 ntBASIC16.21■□□□□ 0.19
ZNF140P52738 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF140P52738 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF140P52738 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF140P52738 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF140P52738 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF140P52738 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.21■□□□□ 0.18
ZNF140P52738 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF140P52738 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
ZNF140P52738 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
ZNF140P52738 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
ZNF140P52738 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF140P52738 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF140P52738 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF140P52738 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF140P52738 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF140P52738 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF140P52738 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF140P52738 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF140P52738 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF140P52738 KRT18P32-201ENST00000424695 1287 ntBASIC16.2■□□□□ 0.18
ZNF140P52738 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF140P52738 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF140P52738 AC004835.2-201ENST00000603762 682 ntBASIC16.2■□□□□ 0.18
ZNF140P52738 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
ZNF140P52738 AC023511.2-201ENST00000618803 211 ntBASIC16.2■□□□□ 0.18
ZNF140P52738 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ZNF140P52738 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF140P52738 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF140P52738 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF140P52738 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF140P52738 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF140P52738 AP3S2-216ENST00000617003 1561 ntBASIC16.2■□□□□ 0.18
ZNF140P52738 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
ZNF140P52738 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF140P52738 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF140P52738 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF140P52738 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ZNF140P52738 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF140P52738 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF140P52738 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF140P52738 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF140P52738 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF140P52738 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF140P52738 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF140P52738 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF140P52738 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF140P52738 GPS2P2-201ENST00000430745 888 ntBASIC16.19■□□□□ 0.18
ZNF140P52738 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ZNF140P52738 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF140P52738 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF140P52738 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF140P52738 AC134684.3-201ENST00000641758 218 ntBASIC16.19■□□□□ 0.18
ZNF140P52738 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
ZNF140P52738 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF140P52738 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF140P52738 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF140P52738 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ZNF140P52738 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF140P52738 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms