Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ASCL1P50553 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 AC100757.3-201ENST00000622361 1406 ntBASIC14.55□□□□□ -0.08
ASCL1P50553 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ASCL1P50553 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ASCL1P50553 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.55□□□□□ -0.08
ASCL1P50553 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ASCL1P50553 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
ASCL1P50553 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ASCL1P50553 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.54□□□□□ -0.08
ASCL1P50553 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ASCL1P50553 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 FLJ38576-201ENST00000623820 2459 ntBASIC14.54□□□□□ -0.08
ASCL1P50553 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ASCL1P50553 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
ASCL1P50553 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ASCL1P50553 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
ASCL1P50553 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.54□□□□□ -0.08
ASCL1P50553 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.54□□□□□ -0.08
ASCL1P50553 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.54□□□□□ -0.08
ASCL1P50553 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.54□□□□□ -0.08
ASCL1P50553 AC004890.2-204ENST00000481968 304 ntBASIC14.54□□□□□ -0.08
ASCL1P50553 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.54□□□□□ -0.08
ASCL1P50553 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.54□□□□□ -0.08
ASCL1P50553 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.54□□□□□ -0.08
ASCL1P50553 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ASCL1P50553 AC005225.4-201ENST00000557330 545 ntBASIC14.54□□□□□ -0.08
ASCL1P50553 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.54□□□□□ -0.08
ASCL1P50553 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.54□□□□□ -0.08
ASCL1P50553 AC027307.3-201ENST00000594262 1100 ntBASIC14.54□□□□□ -0.08
ASCL1P50553 SPDYE12P-201ENST00000618416 771 ntBASIC14.54□□□□□ -0.08
ASCL1P50553 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.54□□□□□ -0.08
ASCL1P50553 AC063926.2-201ENST00000623766 1308 ntBASIC14.54□□□□□ -0.08
ASCL1P50553 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.54□□□□□ -0.08
ASCL1P50553 AL035456.1-201ENST00000456064 1369 ntBASIC14.54□□□□□ -0.08
ASCL1P50553 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.54□□□□□ -0.08
ASCL1P50553 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.54□□□□□ -0.08
ASCL1P50553 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 AL162727.3-201ENST00000635661 2787 ntBASIC14.54□□□□□ -0.08
ASCL1P50553 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ASCL1P50553 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.53□□□□□ -0.08
ASCL1P50553 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.53□□□□□ -0.08
ASCL1P50553 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ASCL1P50553 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ASCL1P50553 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.53□□□□□ -0.08
ASCL1P50553 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.53□□□□□ -0.08
ASCL1P50553 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.53□□□□□ -0.08
ASCL1P50553 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ASCL1P50553 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ASCL1P50553 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.53□□□□□ -0.08
ASCL1P50553 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.53□□□□□ -0.08
ASCL1P50553 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.53□□□□□ -0.08
ASCL1P50553 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.53□□□□□ -0.08
ASCL1P50553 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ASCL1P50553 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.53□□□□□ -0.08
ASCL1P50553 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ASCL1P50553 HLA-V-204ENST00000476601 1289 ntBASIC14.53□□□□□ -0.08
ASCL1P50553 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.53□□□□□ -0.08
ASCL1P50553 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms