Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TOP3BP1-201ENST00000420768 1380 ntBASIC12.96□□□□□ -0.33
CDC34P49427 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CDC34P49427 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.96□□□□□ -0.33
CDC34P49427 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.96□□□□□ -0.33
CDC34P49427 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.96□□□□□ -0.33
CDC34P49427 AP003680.1-201ENST00000598970 3660 ntBASIC12.96□□□□□ -0.33
CDC34P49427 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CDC34P49427 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CDC34P49427 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.96□□□□□ -0.33
CDC34P49427 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 AC011467.2-201ENST00000598425 242 ntBASIC12.96□□□□□ -0.33
CDC34P49427 TERC-201ENST00000602385 541 ntBASIC12.96□□□□□ -0.33
CDC34P49427 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.96□□□□□ -0.33
CDC34P49427 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CDC34P49427 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.96□□□□□ -0.33
CDC34P49427 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.96□□□□□ -0.33
CDC34P49427 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC34P49427 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CDC34P49427 AC136621.1-201ENST00000624017 2304 ntBASIC12.96□□□□□ -0.34
CDC34P49427 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDC34P49427 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDC34P49427 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.96□□□□□ -0.34
CDC34P49427 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDC34P49427 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.96□□□□□ -0.34
CDC34P49427 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CDC34P49427 CICP14-201ENST00000629111 2732 ntBASIC12.96□□□□□ -0.34
CDC34P49427 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.96□□□□□ -0.34
CDC34P49427 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDC34P49427 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CDC34P49427 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
CDC34P49427 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.95□□□□□ -0.34
CDC34P49427 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CDC34P49427 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CDC34P49427 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.95□□□□□ -0.34
CDC34P49427 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.95□□□□□ -0.34
CDC34P49427 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CDC34P49427 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.95□□□□□ -0.34
CDC34P49427 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.95□□□□□ -0.34
CDC34P49427 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.95□□□□□ -0.34
CDC34P49427 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
CDC34P49427 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CDC34P49427 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 LINC00982-205ENST00000420957 435 ntBASIC12.95□□□□□ -0.34
CDC34P49427 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.95□□□□□ -0.34
CDC34P49427 AL845331.1-201ENST00000424978 1190 ntBASIC12.95□□□□□ -0.34
CDC34P49427 AC112907.2-201ENST00000448639 330 ntBASIC12.95□□□□□ -0.34
CDC34P49427 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.95□□□□□ -0.34
CDC34P49427 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.95□□□□□ -0.34
CDC34P49427 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.95□□□□□ -0.34
CDC34P49427 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.95□□□□□ -0.34
CDC34P49427 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.95□□□□□ -0.34
CDC34P49427 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.95□□□□□ -0.34
CDC34P49427 AL590326.2-201ENST00000625139 305 ntBASIC12.95□□□□□ -0.34
CDC34P49427 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.95□□□□□ -0.34
CDC34P49427 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDC34P49427 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CDC34P49427 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms