Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
CHRNA4P43681 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.46■□□□□ 0.23
CHRNA4P43681 RPSAP43-201ENST00000402237 625 ntBASIC16.46■□□□□ 0.23
CHRNA4P43681 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.46■□□□□ 0.23
CHRNA4P43681 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA4P43681 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA4P43681 DNAJB3-201ENST00000446806 729 ntBASIC16.46■□□□□ 0.23
CHRNA4P43681 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA4P43681 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA4P43681 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA4P43681 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 AC073389.1-201ENST00000595595 795 ntBASIC16.46■□□□□ 0.23
CHRNA4P43681 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.46■□□□□ 0.23
CHRNA4P43681 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CHRNA4P43681 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA4P43681 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.46■□□□□ 0.23
CHRNA4P43681 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA4P43681 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.46■□□□□ 0.23
CHRNA4P43681 AC007950.2-201ENST00000615045 2347 ntBASIC16.46■□□□□ 0.23
CHRNA4P43681 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHRNA4P43681 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNA4P43681 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNA4P43681 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNA4P43681 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHRNA4P43681 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA4P43681 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA4P43681 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 CICP6-201ENST00000457191 2729 ntBASIC16.45■□□□□ 0.22
CHRNA4P43681 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA4P43681 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 ACTG1P14-201ENST00000446382 1122 ntBASIC16.45■□□□□ 0.22
CHRNA4P43681 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.45■□□□□ 0.22
CHRNA4P43681 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 RN7SL589P-201ENST00000481268 310 ntBASIC16.45■□□□□ 0.22
CHRNA4P43681 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 AC092865.5-201ENST00000545435 363 ntBASIC16.45■□□□□ 0.22
CHRNA4P43681 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
CHRNA4P43681 LINC01225-203ENST00000563550 1244 ntBASIC16.45■□□□□ 0.22
CHRNA4P43681 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.45■□□□□ 0.22
CHRNA4P43681 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNA4P43681 AC008267.7-201ENST00000624570 1194 ntBASIC16.45■□□□□ 0.22
CHRNA4P43681 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA4P43681 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA4P43681 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNA4P43681 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA4P43681 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA4P43681 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA4P43681 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CHRNA4P43681 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNA4P43681 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA4P43681 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA4P43681 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA4P43681 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHRNA4P43681 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA4P43681 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNA4P43681 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHRNA4P43681 AL365203.3-201ENST00000609742 2057 ntBASIC16.44■□□□□ 0.22
CHRNA4P43681 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHRNA4P43681 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRNA4P43681 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms